User:DCDuring/List of sequenced animal genomes/List of sequenced animal genomes 2016/October 2014

Porifera

• Amphimedon queenslandica ^WSp, a sponge (2009[1])

Ctenophora

• Mnemiopsis leidyi ^WSp, (order Lobata ^WSp) (2012[2])

Placozoa

• Trichoplax adhaerens, a placozoan (2008[3])

Cnidaria

• Hydra magnipapillata, a model medusozoan (2010[4])
• Nematostella vectensis, a model anemone (starlet sea anemone) (2007[5])

Deuterostomia

Echinoderms

• Strongylocentrotus purpuratus, a sea urchin and model deuterostome (2006[6])

Hemichordates

• Saccoglossus kowalevskii, an acorn worm (2009[7])

Urochordates

• Ciona intestinalis, a tunicate (2003[8])
• Ciona savignyi, a tunicate (2007[9])

Cephalochordates

• Branchiostoma floridae, a lancelet (2008[10])

Cyclostomes

• Petromyzon marinus, a lamprey (2009,[11] 2013[12])

Cartilaginous Fish

• Callorhinchus milii, an elephant shark (2007[13])

Bony Fish

Order Beloniformes

• Oryzias latipes, medaka (2007)[14]

Order Coelacanthiformes

• Latimeria chalumnae, West Indian Ocean coelacanth and oldest known living lineage of Sarcopterygii (2013[15][16])

Order Cypriniformes

• Danio rerio, a zebrafish (2007[17])

Order Cyprinodontiformes

• Xiphophorus maculatus, platyfish (2013[18])

Order Esociformes

• Esox lucius, northern pike (2014[19])

Order Gadiformes

• Gadus morhua, Atlantic cod (2011[20])

Order Gasterosteiformes

• Gasterosteus aculeatus, three-spine stickleback (2006, 2012[21])

Order Lepisosteiformes

• Lepisosteus oculatus, spotted gar [22]

Order Salmoniformes

• Oncorhynchus mykiss, rainbow trout (2014[23])

Order Tetraodontiformes

• Takifugu rubripes, a puffer fish ([24] International Fugu Genome Consortium[25] 2002[26])
• Tetraodon nigroviridis, a puffer fish (2004[27])

Amphibians

• Xenopus tropicalis, western clawed frog (2010[28])

Reptiles

Order Crocodylia

• Crocodylus porosus, saltwater crocodile (2007)[29]
• Alligator mississippiensis, American alligator (2012)[30]
• Gavialis gangeticus, Indian gharial (2012)[31]

Order Squamata

• Anolis carolinensis JBL SC #1, green anole lizard (2011[32])
• Python molurus bivittatus, Burmese python (2013)[33]
• Ophiophagus hannah, king cobra (2013)[34]

Order Testudines (Chelonii)

• Chelonia mydas, green sea turtle (2013[35])
• Pelodiscus sinensis, soft-shelled turtle (2013[35])
• Chrysemys picta bellii, western painted turtle (2013)[36]

Birds

Order Anseriformes

• Anas platyrhynchos, Template:WPLook (or wild duck) (2013[37])

Order Falconiformes

• Falco cherrug, Template:WPLook (2013[38])
• Falco peregrinus, peregrine falcon (2013[38])

Order Galliformes

• Gallus gallus, chicken (2004[39])
• Meleagris gallopavo, Template:WPLook (2011[40])
• Tetrao tetrix ^WSp ⇒ Lyrurus tetrix, black grouse (2014[41])

Order Passeriformes

• Ficedula albicollis ^WSp, Template:WPLook (2012[42])
• Ficedula hypoleuca ^WSp, Template:WPLook (2012[42])
• Taeniopygia guttata ^WSp, zebra finch (2010[43])

Mammals

Subclass Prototheria, Order Monotremata, Family Ornithorhynchidae

• Ornithorhynchus anatinus, Platypus (2007[44])

Subclass Theria (Marsupials and Placental Mammals)

Infraclass Metatheria (Marsupials)

Order Didelphimorphia, Family Didelphidae (Opossums)

• Monodelphis domestica, gray short-tailed opossum (2007[45])

Order Dasyuromorphia, Family Dasyuridae

• Sarcophilus harrisii, Tasmanian devil ([46])

Order Diprotodontia

Family Macropodidae

• Macropus eugenii, Tammar wallaby (2011[47])

Family [Phascolarctidae]]

• Phascolarctos cinereus, koala (2013 draft[48])

Infraclass Eutheria (Placental Mammals)

Order Erinaceomorpha, Family Erinaceidae

• Erinaceus europaeus, Western European hedgehog ([49])

Order Chiroptera

Family Megadermatidae

• Megaderma lyra, greater false vampire bat (2013[50])

Family Mormoopidae

• Pteronotus parnellii, Parnell's mustached bat (2013[50])

Family Pteropodidae

• Pteropus vampyrus, fruit bat (2012[51])
• Eidolon helvum, Old World fruit bat (2013[50])

Family Rhinolophidae

• Rhinolophus ferrumequinum. greater horseshoe bat (2013[50])

Family Vespertilionidae

• Myotis lucifugus, little brown bat (2010[52])

Order Primates

Family Galagidae

• Otolemur garnettii, small-eared galago, or bushbaby ([53])

Family Cercopithecidae

• Macaca mulatta, rhesus macaque (2007[54])

Family Hominidae

Subfamily Ponginae

• Pongo pygmaeus/Pongo abelii, Orangutan (Borneo/Sumatra) (2011[55])

Subfamily Homininae

• Gorilla gorilla, western gorilla (2012[56])
• Homo sapiens, Modern Human (Draft 2001[57][58] Complete 2006[59])
• Homo neanderthalensis, Neanderthal (Draft 2010[60])
• Pan troglodytes, Chimpanzee (2005[61])
• Pan paniscus, Bonobo (2012[62])

Family Callitrichidae

• Callithrix jacchus, Marmoset (2010,[63] whole genome 2014[64])

Order Carnivora

Family Felidae

• Felis silvestris catus, Cat (2007[65])
• Panthera leo, African Lion (2013[66])
• Panthera leo krugeri, white lion (2013[66])
• Panthera tigris altaica, Amur tiger (also called Siberian Tiger) (2013[66])
• Panthera tigris tigris, Bengal Tiger (2013[66]
• Panthera uncia, Snow Leopard (2013[66])

Family Canidae

• Canis lupus familiaris, Dog (2005[67])

Family Ursidae

• Ailuropoda melanoleuca, Giant panda (2010[68])

Order Cetacea, Family Delphinidae

• Tursiops truncatus, Bottlenosed dolphin (2012[51])

Order Proboscidea, Family Elephantidae

• Loxodonta africana, African Elephant (2009[69])

Order Perissodactyla (Odd-toed ungulates), Family Equidae

• Equus ferus caballus, Horse (2009[70])

Order Artiodactyla (Even-toed ungulates)

Family Suidae

• Sus scrofa, Pig (2012[71])

Family Bovidae, Genus Bos

• Bos grunniens, Yak 2012 ([72])
• Bos primigenius indicus, zebu or Brahman cattle (2012[73])
• Bos primigenius taurus, Cow 2009 ([74])

Order Rodentia

Family Muridae

• Mus musculus Strain: C57BL/6J, Mouse (2002[75])
• Rattus norvegicus, Rat (2004[76])

Order Lagomorpha

Family Leporidae

• Oryctolagus cuniculus, European rabbit (2010[49][77])

Protostomia

Insects

Coleoptera

• Dendroctonus ponderosae ^WSp Hopkins, Beetle (Template:WPLook) (2013[78])
• Tribolium castaneum ^WSp Strain:GA-2, Beetle (Template:WPLook) (2008[79])

Diptera

• Aedes aegypti Strain:LVPib12, Mosquito (Vector of dengue fever, etc.) (2007[80])
• Anopheles darlingi ^WSp
• Anopheles gambiae ^WSp Strain: PEST, Mosquito (Vector of malaria) (2002[81])
• Anopheles gambiae Strain: M, Mosquito (Vector of malaria) (2010[82])
• Anopheles gambiae Strain: S, Mosquito (Vector of malaria) (2010)[82])
• Anopheles sinensis ^WSp, mosquito (vector of vivax malaria, lymphatic filariasis and Setaria infections, (2014)[83]
• Anopheles stephensii ^WSp
• Clogmia albipunctata ^WSp, Template:WPLook (Transcriptome 2013[84])
• Culex quinquefasciatus ^WSp, Mosquito (Vector of West Nile virus, filariasis etc.) (2010[85])
• Drosophila ananassae ^WSp, Template:WPLook (2007[86])
• Drosophila biarmipes ^WSp, Fruit fly (2011[87])
• Drosophila bipectinata ^WSp, Fruit fly (2011[87])
• Drosophila erecta ^WSp, Fruit fly (2007[86])
• Drosophila elegans ^WSp, Fruit fly (2011[87])
• Drosophila eugracilis ^WSp, Fruit fly (2011[87])
• Drosophila ficusphila ^WSp, Fruit fly (2011[87])
• Drosophila grimshawi ^WSp, Fruit fly (2007[86])
• Drosophila kikkawai ^WSp, Fruit fly (2011[87])
• Drosophila melanogaster, Fruit fly (Model organism) (2000[88])
• Drosophila mojavensis ^WSp, Fruit fly (2007[86])
• Drosophila persimilis ^WSp, Fruit fly (2007[86])
• Drosophila pseudoobscura ^WSp, Fruit fly (2005[89])
• Drosophila rhopaloa ^WSp, Fruit fly (2011[87])
• Drosophila santomea ^WSp, Fruit fly ([90])
• Drosophila sechellia ^WSp, Fruit fly (2007[86])
• Drosophila simulans ^WSp, Fruit fly (2007[86])
• Drosophila takahashi ^WSp, Fruit fly (2011[87])
• Drosophila virilis ^WSp, Fruit fly (2007[86])
• Drosophila willistoni ^WSp, Fruit fly (2007[86])
• Drosophila yakuba ^WSp, Fruit fly (2007[86])
• Episyrphus balteatus ^WSp, hoverfly (Transcriptome 2011[91])
• Megaselia abdita ^WSp, scuttle fly (Transcriptome 2013[84])

Hemiptera

• Acyrthosiphon pisum ^WSp, Aphid (Template:WPLook) (2010[92])

Hymenoptera

• Acromyrmex echinatior ^WSp colony Ae372 Ant (Template:WPLook) (2011[93])
• Apis mellifera ^WSp Bee (honey bee), (Model for eusocial behavior) (2006[94])
• Atta cephalotes ^WSp, Ant (leaf-cutter ant) (2011[95])
• Camponotus floridanus ^WSp, Ant (2010[96])
• Herpegnathos saltator ^WSp, Ant (2010[96])
• Linepithema humile ^WSp, Ant (Template:WPLook) (2011[97])
• Nasonia giraulti ^WSp, Wasp (Parasitoid wasp) (2010[98])
• Nasonia longicornis ^WSp, Wasp (Parasitoid wasp) (2010[98])
• Nasonia vitripennis ^WSp, Wasp (Parasitoid wasp; Model organism) (2010[98])
• Pogonomyrmex barbatus ^WSp, Ant (Template:WPLook) (2011[99])
• Solenopsis invicta ^WSp, Ant (fire ant) (2011[100])

Lepidoptera

• Bombyx mori Strain:p50T, Moth (domestic silk worm) (2004[101])
• Danaus plexippus, Butterfly (monarch butterfly) (2011[102])
• Heliconius melpomene ^WSp, Butterfly (2012)
• Plutella xylostella ^WSp, Moth (Template:WPLook) (2013[103])

Phthiraptera

• Pediculus humanus ^WSp, Louse (sucking louse; Parasite) (2010[104])

Crustaceans

• Daphnia pulex ^WSp, water flea (2007[105][106][107])

Chelicerates

• Ixodes scapularis ^WSp, deer tick (vector of meningitis and Lyme disease) (2008[108])
• Tetranychus urticae ^WSp Template:WPLook (2011[109])

Molluscs

• Crassostrea gigas ^WSp, Template:WPLook (2012[110])
• Lottia gigantea ^WSp, Template:WPLook (2013[111])

Platyhelminthes

• Clonorchis sinensis ^WSp, Liver fluke (Human pathogen) (Draft 2011[112])
• Echinococcus granulosus ^WSp, Tapeworm (Dog pathogen) (2013,[113] 2013[114])
• Echinococcus multilocularis ^WSp, Tapeworm (2013[113])
• Hymenolepis microstoma ^WSp, Tapeworm (2013[113])
• Schistosoma haematobium ^WSp, Schistosome (Human pathogen) (2012[115])
• Schistosoma japonicum ^WSp, Schistosome (Human pathogen) (2009[116])
• Schistosoma mansoni ^WSp, Schistosome (Human pathogen) (2009,[117] 2012[118])
• Schmidtea mediterranea ^WSp, Planarian (Model organism) (2006[119][120])
• Taenia solium ^WSp, Tapeworm (2013[113])

Nematodes

• Ascaris suum ^WSp, Human pathogen (2011 [121])
• Brugia malayi ^WSp, Strain:TRS, Human pathogen (2007[122])
• Caenorhabditis briggsae ^WSp (2003[123])
• Caenorhabditis elegans, Strain:Bristol N2, Model organism (1998[124])
• Meloidogyne hapla ^WSp, Template:WPLook (Plant pathogen) (2008[125])
• Meloidogyne incognita ^WSp, Template:WPLook (Plant pathogen) (2008[126])
• Pristionchus pacificus ^WSp, Model invertebrate (2008[127])

Annelids

• Capitella teleta ^WSp, Polychaete (2007,[128] 2013[111])
• Helobdella robusta ^WSp, Leech (2007,[129] 2013[111])